Wanted to share two very useful resources on scikit-image, by the developers of this open source python library. There are link to slides and resources in the video description.
This presentation will introduce how to analyze three dimensional stacked and volumetric images in Python, mainly using scikit-image. Here we will study how to preprocess data using filtering, binarization and segmentation techniques. Also, we will inspect, count and measure attributes of objects and regions of interest in the data. We will finish the tutorial presenting tools to visualize 3D data.