ANN: SciPy 1.13.1 release

Announcements
1

Hi all,

On behalf of the SciPy development team, I’m pleased to announce the release of SciPy 1.13.1.

Sources and binaries for this release are available at:
https://github.com/scipy/scipy/releases/tag/v1.13.1 and at
https://pypi.org/project/scipy/1.13.1/

One of a few ways to install this release with pip:
pip install scipy==1.13.1

SciPy 1.13.1 Release Notes

SciPy 1.13.1 is a bug-fix release with no new features
compared to 1.13.0. The version of OpenBLAS shipped with
the PyPI binaries has been increased to 0.3.27.

Authors

  • Name (commits)
  • h-vetinari (1)
  • Jake Bowhay (2)
  • Evgeni Burovski (6)
  • Sean Cheah (2)
  • Lucas Colley (2)
  • DWesl (2)
  • Ralf Gommers (7)
  • Ben Greiner (1) +
  • Matt Haberland (2)
  • Gregory R. Lee (1)
  • Philip Loche (1) +
  • Sijo Valayakkad Manikandan (1) +
  • Matti Picus (1)
  • Tyler Reddy (62)
  • Atsushi Sakai (1)
  • Daniel Schmitz (2)
  • Dan Schult (3)
  • Scott Shambaugh (2)
  • Edgar Andrés Margffoy Tuay (1)

A total of 19 people contributed to this release.
People with a “+” by their names contributed a patch for the first time.
This list of names is automatically generated, and may not be fully complete.

Issues closed for 1.13.1

  • #19423 <https://github.com/scipy/scipy/issues/19423>__: BUG: `scipy.ndimage.value_indices` returns empty dict for `intc`/`uintc` dtype on Windows
  • #20264 <https://github.com/scipy/scipy/issues/20264>__: DOC, MAINT: .jupyterlite.doit.db shows up untracked
  • #20392 <https://github.com/scipy/scipy/issues/20392>__: DOC: optimize.root(method=‘lm’) option
  • #20415 <https://github.com/scipy/scipy/issues/20415>__: BUG: csr_array can no longer be initialized with 1D array
  • #20471 <https://github.com/scipy/scipy/issues/20471>__: BUG: `TestEig.test_falker` fails on windows + MKL as well as…
  • #20491 <https://github.com/scipy/scipy/issues/20491>__: BUG: Cannot find `OpenBLAS` on Cygwin
  • #20506 <https://github.com/scipy/scipy/issues/20506>__: BUG: special.spherical_in: derivative at `z=0, n=1` incorrect
  • #20512 <https://github.com/scipy/scipy/issues/20512>__: BUG: `eigh` fails for size 1 array with driver=evd
  • #20531 <https://github.com/scipy/scipy/issues/20531>__: BUG: warning from `optimize.least_squares` for astropy with…
  • #20555 <https://github.com/scipy/scipy/issues/20555>__: BUG: spatial: error in `Rotation.align_vectors()` with an infinite…
  • #20576 <https://github.com/scipy/scipy/issues/20576>__: MAINT, TST: two types of failures observed on maintenance/1.13.x…
  • #20580 <https://github.com/scipy/scipy/issues/20580>__: BUG: scipy.special.factorial2 doesn’t handle `uint32` dtypes
  • #20591 <https://github.com/scipy/scipy/issues/20591>__: BUG: scipy.stats.wilcoxon in 1.13 fails on 2D array with nan…
  • #20623 <https://github.com/scipy/scipy/issues/20623>__: BUG: scipy.spatial.Delaunay, scipy.interpolate.LinearNDInterpolator…
  • #20648 <https://github.com/scipy/scipy/issues/20648>__: BUG: stats.yulesimon: incorrect kurtosis values
  • #20652 <https://github.com/scipy/scipy/issues/20652>__: BUG: incorrect origin tuple handling in ndimage `minimum_filter`…
  • #20660 <https://github.com/scipy/scipy/issues/20660>__: BUG: spatial: `Rotation.align_vectors()` incorrect for anti-parallel…
  • #20670 <https://github.com/scipy/scipy/issues/20670>__: BUG: sparse matrix creation in 1.13 with indices not summing…
  • #20692 <https://github.com/scipy/scipy/issues/20692>__: BUG: stats.zipf: incorrect pmf values
  • #20714 <https://github.com/scipy/scipy/issues/20714>__: CI: scipy installation failing in umfpack tests

Pull requests for 1.13.1

  • #20280 <https://github.com/scipy/scipy/pull/20280>__: MAINT: added doc/source/.jupyterlite.doit.db to .gitignore See…
  • #20322 <https://github.com/scipy/scipy/pull/20322>__: BUG: sparse: align dok_array.pop() to dict.pop() for case with…
  • #20333 <https://github.com/scipy/scipy/pull/20333>__: BUG: sync pocketfft again
  • #20381 <https://github.com/scipy/scipy/pull/20381>__: REL, MAINT: prep for 1.13.1
  • #20401 <https://github.com/scipy/scipy/pull/20401>__: DOC: optimize: fix wrong optional argument name in `root(method=“lm”)`.
  • #20435 <https://github.com/scipy/scipy/pull/20435>__: DOC: add missing deprecations from 1.13.0 release notes
  • #20437 <https://github.com/scipy/scipy/pull/20437>__: MAINT/DOC: fix syntax in 1.13.0 release notes
  • #20444 <https://github.com/scipy/scipy/pull/20444>__: BUG: sparse: Clean up 1D input handling to sparse array/matrix…
  • #20449 <https://github.com/scipy/scipy/pull/20449>__: DOC: remove spurious backtick from release notes
  • #20473 <https://github.com/scipy/scipy/pull/20473>__: BUG: linalg: fix ordering of complex conj gen eigenvalues
  • #20474 <https://github.com/scipy/scipy/pull/20474>__: TST: tolerance bumps for the conda-forge builds
  • #20484 <https://github.com/scipy/scipy/pull/20484>__: TST: compare absolute values of U and VT in pydata-sparse SVD…
  • #20505 <https://github.com/scipy/scipy/pull/20505>__: BUG: Include Python.h before system headers.
  • #20516 <https://github.com/scipy/scipy/pull/20516>__: BUG: linalg: fix eigh(1x1 array, driver=‘evd’) f2py check
  • #20527 <https://github.com/scipy/scipy/pull/20527>__: BUG: `spherical_in` for `n=0` and `z=0`
  • #20530 <https://github.com/scipy/scipy/pull/20530>__: BLD: Fix error message for f2py generation fail
  • #20533 <https://github.com/scipy/scipy/pull/20533>__: TST: Adapt to `array(copy=True)`
  • #20537 <https://github.com/scipy/scipy/pull/20537>__: BLD: Move Python-including files to start of source.
  • #20567 <https://github.com/scipy/scipy/pull/20567>__: REV: 1.13.x: revert changes to f2py and tempita handling in meson.build…
  • #20569 <https://github.com/scipy/scipy/pull/20569>__: update openblas to 0.3.27
  • #20573 <https://github.com/scipy/scipy/pull/20573>__: BUG: Fix error with 180 degree rotation in Rotation.align_vectors()…
  • #20586 <https://github.com/scipy/scipy/pull/20586>__: MAINT: optimize.linprog: fix bug when integrality is a list of…
  • #20592 <https://github.com/scipy/scipy/pull/20592>__: MAINT: stats.wilcoxon: fix failure with multidimensional `x`…
  • #20601 <https://github.com/scipy/scipy/pull/20601>__: MAINT: lint: temporarily disable UP031
  • #20607 <https://github.com/scipy/scipy/pull/20607>__: BUG: handle uint arrays in factorial{,2,k}
  • #20611 <https://github.com/scipy/scipy/pull/20611>__: BUG: prevent QHull message stream being closed twice
  • #20629 <https://github.com/scipy/scipy/pull/20629>__: MAINT/DEV: lint: disable UP032
  • #20633 <https://github.com/scipy/scipy/pull/20633>__: BUG: fix Vor/Delaunay segfaults
  • #20644 <https://github.com/scipy/scipy/pull/20644>__: BUG: ndimage.value_indices: deal with unfixed types
  • #20653 <https://github.com/scipy/scipy/pull/20653>__: BUG: ndimage: fix origin handling for `{minimum, maximum}_filter`
  • #20654 <https://github.com/scipy/scipy/pull/20654>__: MAINT: stats.yulesimon: fix kurtosis
  • #20687 <https://github.com/scipy/scipy/pull/20687>__: BUG: sparse: Fix summing duplicates for CSR/CSC creation from…
  • #20702 <https://github.com/scipy/scipy/pull/20702>__: BUG: stats: Fix `zipf.pmf` and `zipfian.pmf` for int32 `k`
  • #20727 <https://github.com/scipy/scipy/pull/20727>__: CI: pin Python for MacOS conda

Checksums

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